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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs11921520 chr3:14568071 A/G 0.000121 490 16.52 15 16.4 KM Plot
THCA rs11923431 chr3:56561826 T/A 1.73E-5 487 16.67 12.6 8.47 KM Plot
THCA rs11962800 chr6:7886905 C/T 0 490 5.8 16.65 15.83 KM Plot
THCA rs11962883 chr6:133118491 A/C 7.17E-5 486 15.9 15 17.85 KM Plot
THCA rs11964512 chr6:133088803 T/C 1.26E-7 487 15.63 17.13 17.77 KM Plot
THCA rs11971587 chr7:75879451 T/C 0.00011 485 16.43 16.57 11.77 KM Plot
THCA rs11974818 chr7:16439560 C/T 2.66E-9 490 15.15 17.7 17.77 KM Plot
THCA rs11975790 chr7:16470706 C/G 9.2E-12 490 15.17 16.83 19.87 KM Plot
THCA rs11977829 chr7:30113706 A/G 7.95E-5 485 15.13 16.63 12.93 KM Plot
THCA rs11984438 chr7:75879334 A/G 0.000112 490 16.23 16.4 11.77 KM Plot
THCA rs12024159 chr1:224381996 A/C 0.000122 488 16.65 14.8 13.8 KM Plot
THCA rs12031731 chr1:16209607 A/T 0.00018 488 15.3 17.33 17.77 KM Plot
THCA rs12038608 chr1:45951155 A/G 4.1E-5 490 10.4 16.07 16.92 KM Plot
THCA rs12046015 chr1:16241822 G/A 0.0002 484 15.3 17 17.77 KM Plot
THCA rs12048936 chr1:45968605 G/A 4.82E-5 490 10.6 16.07 16.97 KM Plot